IL_11GG_050

3D structure

PDB id

11GG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-ST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.02 Å

Loop

Sequence

GUUG*CUAAUC

Length

10 nucleotides

Bulged bases

11GG|1|C|U|1251, 11GG|1|C|A|1274, 11GG|1|C|U|1275

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_11GG_050 not in the Motif Atlas

Homologous match to IL_6CZR_161

Geometric discrepancy: 0.5732

The information below is about IL_6CZR_161

Detailed Annotation

180 degree turn

Broad Annotation

No text annotation

Motif group

IL_11344.1

Basepair signature

cWW-cSS-L-R-cWW

Number of instances in this motif group

3

Unit IDs

11GG|1|C|G|1249
11GG|1|C|U|1250
11GG|1|C|U|1251
11GG|1|C|G|1252
*
11GG|1|C|C|1271
11GG|1|C|U|1272
11GG|1|C|A|1273
11GG|1|C|A|1274
11GG|1|C|U|1275
11GG|1|C|C|1276

Current chains

Chain C

16S ribosomal RNA

Nearby chains

Chain E

Small ribosomal subunit protein uS3

Chain q

Small ribosomal subunit protein uS10

Chain v

Small ribosomal subunit protein uS14