IL_1NKW_155
3D structure
- PDB id
- 1NKW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CCGCUG*UAUG
- Length
- 10 nucleotides
- Bulged bases
- 1NKW|1|0|U|2706
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1NKW_155 not in the Motif Atlas
- Geometric match to IL_4V88_408
- Geometric discrepancy: 0.3578
- The information below is about IL_4V88_408
- Detailed Annotation
- C-loop with extra cWW pair
- Broad Annotation
- C-loop
- Motif group
- IL_11347.2
- Basepair signature
- cWW-cWW-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
1NKW|1|0|C|2659
1NKW|1|0|C|2660
1NKW|1|0|G|2661
1NKW|1|0|C|2662
1NKW|1|0|U|2663
1NKW|1|0|G|2664
*
1NKW|1|0|U|2704
1NKW|1|0|A|2705
1NKW|1|0|U|2706
1NKW|1|0|G|2707
Current chains
- Chain 0
- 23S ribosomal RNA
Nearby chains
- Chain B
- 50S ribosomal protein L3
- Chain I
- 50S ribosomal protein L14
- Chain L
- 50S ribosomal protein L17
- Chain N
- 50S ribosomal protein L19
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