IL_1NWY_056

3D structure

PDB id

1NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

UGGAG*CGUUGAAA

Length

13 nucleotides

Bulged bases

1NWY|1|0|U|1601

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1NWY_056 not in the Motif Atlas

Homologous match to IL_7A0S_050

Geometric discrepancy: 0.4561

The information below is about IL_7A0S_050

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_28245.1

Basepair signature

cWW-L-R-L-R-L-cWW-L

Number of instances in this motif group

2

Unit IDs

1NWY|1|0|U|1426
1NWY|1|0|G|1427
1NWY|1|0|G|1428
1NWY|1|0|A|1429
1NWY|1|0|G|1430
*
1NWY|1|0|C|1598
1NWY|1|0|G|1599
1NWY|1|0|U|1600
1NWY|1|0|U|1601
1NWY|1|0|G|1602
1NWY|1|0|A|1603
1NWY|1|0|A|1604
1NWY|1|0|A|1605

Current chains

Chain 0

23S RIBOSOMAL RRNA

Nearby chains