IL_1NWY_114
3D structure
- PDB id
- 1NWY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCIN
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- UCUCC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- 1NWY|1|0|U|2668, 1NWY|1|0|C|2669
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1NWY_114 not in the Motif Atlas
- Homologous match to IL_7A0S_096
- Geometric discrepancy: 0.2138
- The information below is about IL_7A0S_096
- Detailed Annotation
- UAA/GAN related, with intercalation
- Broad Annotation
- UAA/GAN related, with intercalation
- Motif group
- IL_82016.1
- Basepair signature
- cWW-L-tHS-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
1NWY|1|0|U|2666
1NWY|1|0|C|2667
1NWY|1|0|U|2668
1NWY|1|0|C|2669
1NWY|1|0|C|2670
*
1NWY|1|0|G|2698
1NWY|1|0|G|2699
1NWY|1|0|U|2700
1NWY|1|0|A|2701
1NWY|1|0|G|2702
Current chains
- Chain 0
- 23S RIBOSOMAL RRNA
Nearby chains
- Chain B
- ribosomal protein L3
- Chain L
- ribosomal protein L17
- Chain N
- ribosomal protein L19
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