IL_1NWY_143
3D structure
- PDB id
- 1NWY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCIN
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CCGCUG*UAUG
- Length
- 10 nucleotides
- Bulged bases
- 1NWY|1|0|U|2706
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1NWY_143 not in the Motif Atlas
- Geometric match to IL_4V88_408
- Geometric discrepancy: 0.3536
- The information below is about IL_4V88_408
- Detailed Annotation
- C-loop with extra cWW pair
- Broad Annotation
- C-loop
- Motif group
- IL_11347.2
- Basepair signature
- cWW-cWW-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
1NWY|1|0|C|2659
1NWY|1|0|C|2660
1NWY|1|0|G|2661
1NWY|1|0|C|2662
1NWY|1|0|U|2663
1NWY|1|0|G|2664
*
1NWY|1|0|U|2704
1NWY|1|0|A|2705
1NWY|1|0|U|2706
1NWY|1|0|G|2707
Current chains
- Chain 0
- 23S RIBOSOMAL RRNA
Nearby chains
- Chain B
- ribosomal protein L3
- Chain I
- ribosomal protein L14
- Chain L
- ribosomal protein L17
- Chain N
- ribosomal protein L19
Coloring options: