IL_23WI_034
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GAAG*CCUGC
- Length
- 9 nucleotides
- Bulged bases
- 23WI|1|5|U|1559
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_23WI_034 not in the Motif Atlas
- Geometric match to IL_8B0X_115
- Geometric discrepancy: 0.0943
- The information below is about IL_8B0X_115
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_60418.1
- Basepair signature
- cWW-cWW-L-R-cWW
- Number of instances in this motif group
- 5
Unit IDs
23WI|1|5|G|1432
23WI|1|5|A|1433
23WI|1|5|A|1434
23WI|1|5|G|1435
*
23WI|1|5|C|1557
23WI|1|5|C|1558
23WI|1|5|U|1559
23WI|1|5|G|1560
23WI|1|5|C|1561
Current chains
- Chain 5
- RNA (2014-MER)
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain C
- Large ribosomal subunit protein uL2
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