IL_23WI_082
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- UGUUC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- 23WI|1|5|U|2689, 23WI|1|5|U|2690
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_23WI_082 not in the Motif Atlas
- Homologous match to IL_7A0S_096
- Geometric discrepancy: 0.1849
- The information below is about IL_7A0S_096
- Detailed Annotation
- UAA/GAN related, with intercalation
- Broad Annotation
- UAA/GAN related, with intercalation
- Motif group
- IL_82016.1
- Basepair signature
- cWW-L-tHS-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
23WI|1|5|U|2687
23WI|1|5|G|2688
23WI|1|5|U|2689
23WI|1|5|U|2690
23WI|1|5|C|2691
*
23WI|1|5|G|2718
23WI|1|5|G|2719
23WI|1|5|U|2720
23WI|1|5|A|2721
23WI|1|5|G|2722
Current chains
- Chain 5
- RNA (2014-MER)
Nearby chains
- Chain D
- Large ribosomal subunit protein uL3
- Chain N
- Large ribosomal subunit protein bL17
- Chain P
- 50S ribosomal protein L19
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