IL_23WI_149
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- UGUAG*CGUAGAGA
- Length
- 13 nucleotides
- Bulged bases
- 23WI|1|a|A|702
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_23WI_149 not in the Motif Atlas
- Geometric match to IL_8B0X_034
- Geometric discrepancy: 0.1
- The information below is about IL_8B0X_034
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_71972.2
- Basepair signature
- cWW-tSS-tSH-L-R-tHS-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
23WI|1|a|U|684
23WI|1|a|G|685
23WI|1|a|U|686
23WI|1|a|A|687
23WI|1|a|G|688
*
23WI|1|a|C|699
23WI|1|a|G|700
23WI|1|a|U|701
23WI|1|a|A|702
23WI|1|a|G|703
23WI|1|a|A|704
23WI|1|a|G|705
23WI|1|a|A|706
Current chains
- Chain a
- RNA (1539-MER)
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain k
- Small ribosomal subunit protein uS11
Coloring options: