IL_28LN_026
3D structure
- PDB id
- 28LN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- XBP1u-stalled RPL4 RNC in complex with NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UCCA*UUAA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_28LN_026 not in the Motif Atlas
- Geometric match to IL_5C5W_001
- Geometric discrepancy: 0.1821
- The information below is about IL_5C5W_001
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_71194.5
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 43
Unit IDs
28LN|1|A2|U|566
28LN|1|A2|C|567
28LN|1|A2|C|568
28LN|1|A2|A|569
*
28LN|1|A2|U|581
28LN|1|A2|U|582
28LN|1|A2|A|583
28LN|1|A2|A|584
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AJ
- 40S ribosomal protein S9
- Chain AY
- 40S ribosomal protein S24
Coloring options: