3D structure

PDB id
28LN (explore in PDB, NAKB, or RNA 3D Hub)
Description
XBP1u-stalled RPL4 RNC in complex with NAC
Experimental method
ELECTRON MICROSCOPY
Resolution
2.7 Å

Loop

Sequence
CGAUGC*GGGCAG
Length
12 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

28LN|1|A2|C|1098
28LN|1|A2|G|1099
28LN|1|A2|A|1100
28LN|1|A2|U|1101
28LN|1|A2|G|1102
28LN|1|A2|C|1103
*
28LN|1|A2|G|1129
28LN|1|A2|G|1130
28LN|1|A2|G|1131
28LN|1|A2|C|1132
28LN|1|A2|A|1133
28LN|1|A2|G|1134

Current chains

Chain A2
18S rRNA

Nearby chains

Chain AA
Small ribosomal subunit protein uS2
Chain AB
40S ribosomal protein S3a
Chain AN
40S ribosomal protein S13
Chain AR
40S ribosomal protein S17
Chain Aa
40S ribosomal protein S26
Chain Ab
40S ribosomal protein S27

Coloring options:

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