IL_28LN_239

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

ACAU(PSU)U*ACCA(PSU)

Length

11 nucleotides

Bulged bases

28LN|1|B5|C|4669, 28LN|1|B5|C|4670

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|B5|A|4623
28LN|1|B5|C|4624
28LN|1|B5|A|4625
28LN|1|B5|U|4626
28LN|1|B5|PSU|4627
28LN|1|B5|U|4628
*
28LN|1|B5|A|4668
28LN|1|B5|C|4669
28LN|1|B5|C|4670
28LN|1|B5|A|4671
28LN|1|B5|PSU|4672

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BB

Large ribosomal subunit protein uL3

Chain BV

60S ribosomal protein L23

Chain BW

60S ribosomal protein L24