IL_2JL6_042
3D structure
- PDB id
- 2JL6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Insights into translational termination from the structure of RF2 bound to the ribosome (part 2 of 4).This file contains the 50s subunit.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.45 Å
Loop
- Sequence
- GUUG*CAUC
- Length
- 8 nucleotides
- Bulged bases
- 2JL6|1|A|U|1061
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_2JL6_042 not in the Motif Atlas
- Geometric match to IL_6PRV_001
- Geometric discrepancy: 0.2359
- The information below is about IL_6PRV_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_28482.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
2JL6|1|A|G|1059
2JL6|1|A|U|1060
2JL6|1|A|U|1061
2JL6|1|A|G|1062
*
2JL6|1|A|C|1076
2JL6|1|A|A|1077
2JL6|1|A|U|1078
2JL6|1|A|C|1079
Current chains
- Chain A
- 23S RIBOSOMAL RNA
Nearby chains
- Chain K
- 50S RIBOSOMAL PROTEIN L11
- Chain Q
- 50S RIBOSOMAL PROTEIN L16
- Chain Z
- 50S RIBOSOMAL PROTEIN L25
Coloring options: