IL_3DHS_001
3D structure
- PDB id
- 3DHS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mapping metal-binding sites in the catalytic domain of bacterial RNase P RNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- AUCA*UGAU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: AUCA,UGAU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3DHS_001 not in the Motif Atlas
- Geometric match to IL_5EW4_002
- Geometric discrepancy: 0.2812
- The information below is about IL_5EW4_002
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
3DHS|1|A|A|5
3DHS|1|A|U|6
3DHS|1|A|C|7
3DHS|1|A|A|8
*
3DHS|1|A|U|407
3DHS|1|A|G|408
3DHS|1|A|A|409
3DHS|1|A|U|410
Current chains
- Chain A
- RNase P RNA
Nearby chains
No other chains within 10ÅColoring options: