IL_3J45_011
3D structure
- PDB id
- 3J45 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a non-translocating SecY protein channel with the 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.5 Å
Loop
- Sequence
- UAAG*CGUUAUAA
- Length
- 12 nucleotides
- Bulged bases
- 3J45|1|1|U|100, 3J45|1|1|A|101, 3J45|1|1|U|102
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J45_011 not in the Motif Atlas
- Geometric match to IL_1U63_003
- Geometric discrepancy: 0.3106
- The information below is about IL_1U63_003
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_24134.1
- Basepair signature
- cWW-tSS-L-R-L-tHS-L-cWW-L-L
- Number of instances in this motif group
- 3
Unit IDs
3J45|1|1|U|82
3J45|1|1|A|83
3J45|1|1|A|84
3J45|1|1|G|85
*
3J45|1|1|C|97
3J45|1|1|G|98
3J45|1|1|U|99
3J45|1|1|U|100
3J45|1|1|A|101
3J45|1|1|U|102
3J45|1|1|A|103
3J45|1|1|A|104
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain U
- 50S ribosomal protein L24
- Chain Y
- 50S ribosomal protein L29
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