IL_3J6X_150
3D structure
- PDB id
- 3J6X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- S. cerevisiae 80S ribosome bound with Taura syndrome virus (TSV) IRES, 5 degree rotation (Class II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.1 Å
Loop
- Sequence
- UCUUC*GGAAUA
- Length
- 11 nucleotides
- Bulged bases
- 3J6X|1|2S|U|1629, 3J6X|1|2S|U|1815
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J6X_150 not in the Motif Atlas
- Homologous match to IL_8C3A_072
- Geometric discrepancy: 0.2688
- The information below is about IL_8C3A_072
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_48431.1
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
3J6X|1|2S|U|1627
3J6X|1|2S|C|1628
3J6X|1|2S|U|1629
3J6X|1|2S|U|1630
3J6X|1|2S|C|1631
*
3J6X|1|2S|G|1811
3J6X|1|2S|G|1812
3J6X|1|2S|A|1813
3J6X|1|2S|A|1814
3J6X|1|2S|U|1815
3J6X|1|2S|A|1816
Current chains
- Chain 2S
- 25S ribosomal RNA
Nearby chains
- Chain 67
- 60S ribosomal protein L27
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