IL_3J78_199
3D structure
- PDB id
- 3J78 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.3 Å
Loop
- Sequence
- UAAUU*ACCA
- Length
- 9 nucleotides
- Bulged bases
- 3J78|1|2S|C|3092
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J78_199 not in the Motif Atlas
- Homologous match to IL_5TBW_117
- Geometric discrepancy: 0.2085
- The information below is about IL_5TBW_117
- Detailed Annotation
- Major groove minor groove platform with tHH
- Broad Annotation
- No text annotation
- Motif group
- IL_14592.1
- Basepair signature
- cWW-tHH-cWW-L-L
- Number of instances in this motif group
- 4
Unit IDs
3J78|1|2S|U|3047
3J78|1|2S|A|3048
3J78|1|2S|A|3049
3J78|1|2S|U|3050
3J78|1|2S|U|3051
*
3J78|1|2S|A|3091
3J78|1|2S|C|3092
3J78|1|2S|C|3093
3J78|1|2S|A|3094
Current chains
- Chain 2S
- 25S ribosomal RNA
Nearby chains
- Chain 73
- 60S ribosomal protein L23
- Chain 74
- 60S ribosomal protein L24
- Chain L3
- 60S ribosomal protein L3
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