IL_3J8G_030
3D structure
- PDB id
- 3J8G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5 Å
Loop
- Sequence
- GGG*CAAUC
- Length
- 8 nucleotides
- Bulged bases
- 3J8G|1|B|G|776, 3J8G|1|B|A|788, 3J8G|1|B|A|789
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J8G_030 not in the Motif Atlas
- Geometric match to IL_5TBW_033
- Geometric discrepancy: 0.184
- The information below is about IL_5TBW_033
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_90991.8
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
3J8G|1|B|G|775
3J8G|1|B|G|776
3J8G|1|B|G|777
*
3J8G|1|B|C|787
3J8G|1|B|A|788
3J8G|1|B|A|789
3J8G|1|B|U|790
3J8G|1|B|C|791
Current chains
- Chain B
- 23S rRNA
Nearby chains
- Chain 6
- 50S ribosomal protein L34
- Chain C
- 50S ribosomal protein L2
- Chain E
- 50S ribosomal protein L4
- Chain S
- 50S ribosomal protein L22
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