IL_3J8G_072

3D structure

PDB id

3J8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

CGUAAC*GGAGAAG

Length

13 nucleotides

Bulged bases

3J8G|1|B|G|1699

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J8G_072 not in the Motif Atlas

Homologous match to IL_7A0S_063

Geometric discrepancy: 0.1811

The information below is about IL_7A0S_063

Detailed Annotation

tSH-tSH-tHH-tHS

Broad Annotation

No text annotation

Motif group

IL_20700.1

Basepair signature

cWW-tSH-L-R-tHH-tHS-cWW

Number of instances in this motif group

10

Unit IDs

3J8G|1|B|C|1686
3J8G|1|B|G|1687
3J8G|1|B|U|1688
3J8G|1|B|A|1689
3J8G|1|B|A|1690
3J8G|1|B|C|1691
*
3J8G|1|B|G|1696
3J8G|1|B|G|1697
3J8G|1|B|A|1698
3J8G|1|B|G|1699
3J8G|1|B|A|1700
3J8G|1|B|A|1701
3J8G|1|B|G|1702

Current chains

Chain B

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2