IL_3J9M_016
3D structure
- PDB id
- 3J9M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitochondrial ribosome (class 1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GA*UUC
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J9M_016 not in the Motif Atlas
- Geometric match to IL_4V83_236
- Geometric discrepancy: 0.3217
- The information below is about IL_4V83_236
- Detailed Annotation
- Single stack bend
- Broad Annotation
- No text annotation
- Motif group
- IL_90729.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 30
Unit IDs
3J9M|1|A|G|2032
3J9M|1|A|A|2033
*
3J9M|1|A|U|2041
3J9M|1|A|U|2042
3J9M|1|A|C|2043
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 3
- bL35m
- Chain M
- uL15m
- Chain W
- bL27m
- Chain i
- mL51
Coloring options: