IL_3J9M_037
3D structure
- PDB id
- 3J9M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitochondrial ribosome (class 1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CAUAAUCACUUG*CCUG
- Length
- 16 nucleotides
- Bulged bases
- 3J9M|1|A|A|2601, 3J9M|1|A|U|2607, 3J9M|1|A|U|2626
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J9M_037 not in the Motif Atlas
- Homologous match to IL_4WF9_077
- Geometric discrepancy: 0.5675
- The information below is about IL_4WF9_077
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_84014.1
- Basepair signature
- cWW-L-R-cHW-cWW-L-L-tSW-L
- Number of instances in this motif group
- 8
Unit IDs
3J9M|1|A|C|2597
3J9M|1|A|A|2598
3J9M|1|A|U|2599
3J9M|1|A|A|2600
3J9M|1|A|A|2601
3J9M|1|A|U|2602
3J9M|1|A|C|2603
3J9M|1|A|A|2604
3J9M|1|A|C|2605
3J9M|1|A|U|2606
3J9M|1|A|U|2607
3J9M|1|A|G|2608
*
3J9M|1|A|C|2624
3J9M|1|A|C|2625
3J9M|1|A|U|2626
3J9M|1|A|G|2627
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain A3
- mS38
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: