IL_3J9Z_201
3D structure
- PDB id
- 3J9Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UGUAG*CGUAGAGA
- Length
- 13 nucleotides
- Bulged bases
- 3J9Z|1|SA|A|702
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J9Z_201 not in the Motif Atlas
- Homologous match to IL_5J7L_035
- Geometric discrepancy: 0.1356
- The information below is about IL_5J7L_035
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_01488.3
- Basepair signature
- cWW-tSS-tSH-L-R-tHS-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
3J9Z|1|SA|U|684
3J9Z|1|SA|G|685
3J9Z|1|SA|U|686
3J9Z|1|SA|A|687
3J9Z|1|SA|G|688
*
3J9Z|1|SA|C|699
3J9Z|1|SA|G|700
3J9Z|1|SA|U|701
3J9Z|1|SA|A|702
3J9Z|1|SA|G|703
3J9Z|1|SA|A|704
3J9Z|1|SA|G|705
3J9Z|1|SA|A|706
Current chains
- Chain SA
- 16S ribosomal RNA
Nearby chains
- Chain LA
- Large subunit ribosomal RNA; LSU rRNA
- Chain SK
- 30S ribosomal protein S11
Coloring options: