IL_3JA1_042

3D structure

PDB id

3JA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUUG*CAUC

Length

8 nucleotides

Bulged bases

3JA1|1|LA|U|1061

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3JA1_042 not in the Motif Atlas

Homologous match to IL_6PRV_001

Geometric discrepancy: 0.5345

The information below is about IL_6PRV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28482.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

4

Unit IDs

3JA1|1|LA|G|1059
3JA1|1|LA|U|1060
3JA1|1|LA|U|1061
3JA1|1|LA|G|1062
*
3JA1|1|LA|C|1076
3JA1|1|LA|A|1077
3JA1|1|LA|U|1078
3JA1|1|LA|C|1079

Current chains

Chain LA

23S ribosomal RNA

Nearby chains

Chain LJ

50S ribosomal protein L10

Chain LK

50S ribosomal protein L11