IL_3JAN_096
3D structure
- PDB id
- 3JAN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the scanning state of the mammalian SRP-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- GA*UUC
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JAN_096 not in the Motif Atlas
- Geometric match to IL_4V83_236
- Geometric discrepancy: 0.3466
- The information below is about IL_4V83_236
- Detailed Annotation
- Single stack bend
- Broad Annotation
- No text annotation
- Motif group
- IL_90729.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 30
Unit IDs
3JAN|1|5|G|2622
3JAN|1|5|A|2623
*
3JAN|1|5|U|2632
3JAN|1|5|U|2633
3JAN|1|5|C|2634
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain R
- Ribosomal protein eL19
- Chain U
- Ribosomal protein eL22
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