IL_3JBN_120
3D structure
- PDB id
- 3JBN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- GGG*UAAUC
- Length
- 8 nucleotides
- Bulged bases
- 3JBN|1|AA|G|1027, 3JBN|1|AA|A|1039, 3JBN|1|AA|A|1040
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JBN_120 not in the Motif Atlas
- Homologous match to IL_5TBW_033
- Geometric discrepancy: 0.1558
- The information below is about IL_5TBW_033
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_90991.8
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
3JBN|1|AA|G|1026
3JBN|1|AA|G|1027
3JBN|1|AA|G|1028
*
3JBN|1|AA|U|1038
3JBN|1|AA|A|1039
3JBN|1|AA|A|1040
3JBN|1|AA|U|1041
3JBN|1|AA|C|1042
Current chains
- Chain AA
- 28S ribosomal RNA
Nearby chains
- Chain AD
- 60S ribosomal protein uL2
- Chain AP
- 60S ribosomal protein eL15
- Chain AW
- 60S ribosomal protein uL22
- Chain Ac
- 60S ribosomal protein eL37
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