IL_3JBN_144
3D structure
- PDB id
- 3JBN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- GAAGUAG*CGAAAC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JBN_144 not in the Motif Atlas
- Homologous match to IL_5TBW_061
- Geometric discrepancy: 0.1148
- The information below is about IL_5TBW_061
- Detailed Annotation
- 7x6 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_76042.3
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 9
Unit IDs
3JBN|1|AA|G|1593
3JBN|1|AA|A|1594
3JBN|1|AA|A|1595
3JBN|1|AA|G|1596
3JBN|1|AA|U|1597
3JBN|1|AA|A|1598
3JBN|1|AA|G|1599
*
3JBN|1|AA|C|2647
3JBN|1|AA|G|2648
3JBN|1|AA|A|2649
3JBN|1|AA|A|2650
3JBN|1|AA|A|2651
3JBN|1|AA|C|2652
Current chains
- Chain AA
- 28S ribosomal RNA
Nearby chains
- Chain AF
- 60S ribosomal protein uL4
- Chain AW
- 60S ribosomal protein uL22
Coloring options: