IL_3JBN_155
3D structure
- PDB id
- 3JBN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- UGGAAUC*GGAGAAG
- Length
- 14 nucleotides
- Bulged bases
- 3JBN|1|AA|U|1873, 3JBN|1|AA|A|1886
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JBN_155 not in the Motif Atlas
- Homologous match to IL_5TBW_073
- Geometric discrepancy: 0.1997
- The information below is about IL_5TBW_073
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_60192.2
- Basepair signature
- cWW-tSH-tSH-tSS-tHS-L-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
3JBN|1|AA|U|1868
3JBN|1|AA|G|1869
3JBN|1|AA|G|1870
3JBN|1|AA|A|1871
3JBN|1|AA|A|1872
3JBN|1|AA|U|1873
3JBN|1|AA|C|1874
*
3JBN|1|AA|G|1884
3JBN|1|AA|G|1885
3JBN|1|AA|A|1886
3JBN|1|AA|G|1887
3JBN|1|AA|A|1888
3JBN|1|AA|A|1889
3JBN|1|AA|G|1890
Current chains
- Chain AA
- 28S ribosomal RNA
Nearby chains
- Chain A1
- 60S ribosomal protein eL27
- Chain A6
- 60S ribosomal protein eL30
- Chain AT
- 60S ribosomal protein eL19
- Chain Aa
- 60S ribosomal protein eL34
- Chain Ah
- 60S ribosomal protein eL43
- Chain U
- 40S ribosomal protein uS15
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