IL_3JBN_200
3D structure
- PDB id
- 3JBN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- UGAC*GAUUAAA
- Length
- 11 nucleotides
- Bulged bases
- 3JBN|1|AA|U|3526, 3JBN|1|AA|A|3529
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JBN_200 not in the Motif Atlas
- Homologous match to IL_8C3A_123
- Geometric discrepancy: 0.3574
- The information below is about IL_8C3A_123
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.12
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 35
Unit IDs
3JBN|1|AA|U|3390
3JBN|1|AA|G|3391
3JBN|1|AA|A|3392
3JBN|1|AA|C|3393
*
3JBN|1|AA|G|3524
3JBN|1|AA|A|3525
3JBN|1|AA|U|3526
3JBN|1|AA|U|3527
3JBN|1|AA|A|3528
3JBN|1|AA|A|3529
3JBN|1|AA|A|3530
Current chains
- Chain AA
- 28S ribosomal RNA
Nearby chains
- Chain AE
- 60S ribosomal protein uL3
- Chain AK
- 60S ribosomal protein uL13
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