IL_3JCJ_182
3D structure
- PDB id
- 3JCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GAUGU*GCGC
- Length
- 9 nucleotides
- Bulged bases
- 3JCJ|1|A|U|1033
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JCJ_182 not in the Motif Atlas
- Geometric match to IL_4V88_431
- Geometric discrepancy: 0.2481
- The information below is about IL_4V88_431
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
3JCJ|1|A|G|1031
3JCJ|1|A|A|1032
3JCJ|1|A|U|1033
3JCJ|1|A|G|1034
3JCJ|1|A|U|1035
*
3JCJ|1|A|G|1120
3JCJ|1|A|C|1121
3JCJ|1|A|G|1122
3JCJ|1|A|C|1123
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 0
- 5S ribosomal RNA; 5S rRNA
- Chain F
- 50S ribosomal protein L6
- Chain L
- 50S ribosomal protein L16
- Chain U
- 50S ribosomal protein L25
- Chain d
- 50S ribosomal protein L36
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