IL_4CSU_119
3D structure
- PDB id
- 4CSU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of the 50S ribosome subunit bound with ObgE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.5 Å
Loop
- Sequence
- UAAG*CGUUAUAA
- Length
- 12 nucleotides
- Bulged bases
- 4CSU|1|B|U|100, 4CSU|1|B|A|101, 4CSU|1|B|U|102
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4CSU_119 not in the Motif Atlas
- Geometric match to IL_1U63_003
- Geometric discrepancy: 0.2859
- The information below is about IL_1U63_003
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_24134.1
- Basepair signature
- cWW-tSS-L-R-L-tHS-L-cWW-L-L
- Number of instances in this motif group
- 3
Unit IDs
4CSU|1|B|U|82
4CSU|1|B|A|83
4CSU|1|B|A|84
4CSU|1|B|G|85
*
4CSU|1|B|C|97
4CSU|1|B|G|98
4CSU|1|B|U|99
4CSU|1|B|U|100
4CSU|1|B|A|101
4CSU|1|B|U|102
4CSU|1|B|A|103
4CSU|1|B|A|104
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain 1
- 50S RIBOSOMAL PROTEIN L29
- Chain U
- 50S RIBOSOMAL PROTEIN L24
Coloring options: