IL_4CUX_113
3D structure
- PDB id
- 4CUX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UGCAUGG*UCUGUGAUG
- Length
- 16 nucleotides
- Bulged bases
- 4CUX|1|2|C|1274, 4CUX|1|2|C|1431, 4CUX|1|2|U|1432, 4CUX|1|2|G|1435
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4CUX_113 not in the Motif Atlas
- Geometric match to IL_8P9A_439
- Geometric discrepancy: 0.1805
- The information below is about IL_8P9A_439
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_99893.1
- Basepair signature
- cWW-tHS-tWH-cWH-cWW-L-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
4CUX|1|2|U|1272
4CUX|1|2|G|1273
4CUX|1|2|C|1274
4CUX|1|2|A|1275
4CUX|1|2|U|1276
4CUX|1|2|G|1277
4CUX|1|2|G|1278
*
4CUX|1|2|U|1430
4CUX|1|2|C|1431
4CUX|1|2|U|1432
4CUX|1|2|G|1433
4CUX|1|2|U|1434
4CUX|1|2|G|1435
4CUX|1|2|A|1436
4CUX|1|2|U|1437
4CUX|1|2|G|1438
Current chains
- Chain 2
- 18S RRNA
Nearby chains
- Chain Z
- RNA OF CRICKET-PARALYSIS-VIRUS-IRES
Coloring options: