IL_4UG0_081
3D structure
- PDB id
- 4UG0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF THE HUMAN 80S RIBOSOME
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UGGAAUG*CGAGAGA
- Length
- 14 nucleotides
- Bulged bases
- 4UG0|1|L5|U|2661, 4UG0|1|L5|A|2674
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UG0_081 not in the Motif Atlas
- Homologous match to IL_5TBW_073
- Geometric discrepancy: 0.2091
- The information below is about IL_5TBW_073
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_60192.2
- Basepair signature
- cWW-tSH-tSH-tSS-tHS-L-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
4UG0|1|L5|U|2656
4UG0|1|L5|G|2657
4UG0|1|L5|G|2658
4UG0|1|L5|A|2659
4UG0|1|L5|A|2660
4UG0|1|L5|U|2661
4UG0|1|L5|G|2662
*
4UG0|1|L5|C|2672
4UG0|1|L5|G|2673
4UG0|1|L5|A|2674
4UG0|1|L5|G|2675
4UG0|1|L5|A|2676
4UG0|1|L5|G|2677
4UG0|1|L5|A|2678
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain LR
- 60S RIBOSOMAL PROTEIN L19
- Chain LZ
- 60S RIBOSOMAL PROTEIN L27
- Chain Lc
- 60S RIBOSOMAL PROTEIN L30
- Chain Lg
- 60S RIBOSOMAL PROTEIN L34
- Chain Lp
- 60S RIBOSOMAL PROTEIN L37A
- Chain SN
- 40S RIBOSOMAL PROTEIN S13
Coloring options: