IL_4UG0_133
3D structure
- PDB id
- 4UG0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF THE HUMAN 80S RIBOSOME
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GUCCUG*CGUCAC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UG0_133 not in the Motif Atlas
- Geometric match to IL_4EYA_005
- Geometric discrepancy: 0.3887
- The information below is about IL_4EYA_005
- Detailed Annotation
- Tandem non-canonical cWW pairs with near WC pairs
- Broad Annotation
- Tandem non-canonical cWW pairs with near WC pairs
- Motif group
- IL_82292.2
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
4UG0|1|L5|G|4884
4UG0|1|L5|U|4885
4UG0|1|L5|C|4886
4UG0|1|L5|C|4887
4UG0|1|L5|U|4888
4UG0|1|L5|G|4889
*
4UG0|1|L5|C|4930
4UG0|1|L5|G|4931
4UG0|1|L5|U|4932
4UG0|1|L5|C|4933
4UG0|1|L5|A|4934
4UG0|1|L5|C|4935
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain LE
- 60S RIBOSOMAL PROTEIN L6
- Chain LM
- 60S RIBOSOMAL PROTEIN L14
- Chain LO
- 60S RIBOSOMAL PROTEIN L13A
- Chain Lf
- 60S RIBOSOMAL PROTEIN L35A
Coloring options: