IL_4UJE_078
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- CGAUC*GGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UJE_078 not in the Motif Atlas
- Homologous match to IL_5TBW_067
- Geometric discrepancy: 0.2054
- The information below is about IL_5TBW_067
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_95716.2
- Basepair signature
- cWW-cWW-tHS-tHS-tSH-cWW
- Number of instances in this motif group
- 18
Unit IDs
4UJE|1|A2|C|2566
4UJE|1|A2|G|2567
4UJE|1|A2|A|2568
4UJE|1|A2|U|2569
4UJE|1|A2|C|2570
*
4UJE|1|A2|G|2729
4UJE|1|A2|G|2730
4UJE|1|A2|G|2731
4UJE|1|A2|A|2732
4UJE|1|A2|G|2733
Current chains
- Chain A2
- 28S Ribosomal RNA
Nearby chains
- Chain CA
- 60S RIBOSOMAL PROTEIN L8
- Chain CG
- 60S RIBOSOMAL PROTEIN L7A
- Chain CZ
- 60S RIBOSOMAL PROTEIN L27
- Chain Cg
- 60S RIBOSOMAL PROTEIN L34
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