IL_4UJE_109
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- GGAG*CGCCGGUGAAAUAC
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UJE_109 not in the Motif Atlas
- Geometric match to IL_1MZP_003
- Geometric discrepancy: 0.2267
- The information below is about IL_1MZP_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_75283.2
- Basepair signature
- cWW-tSS-L-R-L-tHS-L-cWW-L-tWH-tWH-L-L-R
- Number of instances in this motif group
- 3
Unit IDs
4UJE|1|A2|G|3939
4UJE|1|A2|G|3940
4UJE|1|A2|A|3941
4UJE|1|A2|G|3942
*
4UJE|1|A2|C|4006
4UJE|1|A2|G|4007
4UJE|1|A2|C|4008
4UJE|1|A2|C|4009
4UJE|1|A2|G|4010
4UJE|1|A2|G|4011
4UJE|1|A2|U|4012
4UJE|1|A2|G|4013
4UJE|1|A2|A|4014
4UJE|1|A2|A|4015
4UJE|1|A2|A|4016
4UJE|1|A2|U|4017
4UJE|1|A2|A|4018
4UJE|1|A2|C|4019
Current chains
- Chain A2
- 28S Ribosomal RNA
Nearby chains
- Chain AW
- Transfer RNA; tRNA
- Chain Cu
- 60S RIBOSOMAL PROTEIN L10A
Coloring options: