IL_4UJE_187
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- CGUAG*UCAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UJE_187 not in the Motif Atlas
- Homologous match to IL_4V88_418
- Geometric discrepancy: 0.2005
- The information below is about IL_4V88_418
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.4
- Basepair signature
- cWW-R-L-tHS-tHW-cWW
- Number of instances in this motif group
- 18
Unit IDs
4UJE|1|B1|C|676
4UJE|1|B1|G|677
4UJE|1|B1|U|678
4UJE|1|B1|A|679
4UJE|1|B1|G|680
*
4UJE|1|B1|U|1025
4UJE|1|B1|C|1026
4UJE|1|B1|A|1027
4UJE|1|B1|A|1028
4UJE|1|B1|G|1029
Current chains
- Chain B1
- 18S Ribosomal RNA
Nearby chains
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain BL
- 40S RIBOSOMAL PROTEIN S11
- Chain BN
- 40S RIBOSOMAL PROTEIN S13
- Chain BW
- 40S RIBOSOMAL PROTEIN S15A
- Chain BX
- 40S RIBOSOMAL PROTEIN S23
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