IL_4UJE_198
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- GUAU*AGAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UJE_198 not in the Motif Atlas
- Homologous match to IL_4V88_432
- Geometric discrepancy: 0.2037
- The information below is about IL_4V88_432
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
4UJE|1|B1|G|942
4UJE|1|B1|U|943
4UJE|1|B1|A|944
4UJE|1|B1|U|945
*
4UJE|1|B1|A|981
4UJE|1|B1|G|982
4UJE|1|B1|A|983
4UJE|1|B1|C|984
Current chains
- Chain B1
- 18S Ribosomal RNA
Nearby chains
- Chain BB
- 40S RIBOSOMAL PROTEIN S3A
- Chain BO
- 40S RIBOSOMAL PROTEIN S14
- Chain Ba
- 40S RIBOSOMAL PROTEIN S26
- Chain CA
- 60S RIBOSOMAL PROTEIN L8
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