IL_4V49_071

3D structure

PDB id

4V49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

8.7 Å

Loop

Sequence

CAAG*CGAACG

Length

10 nucleotides

Bulged bases

4V49|1|B0|A|357, 4V49|1|B0|C|358

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V49_071 not in the Motif Atlas

Homologous match to IL_7A0S_008

Geometric discrepancy: 0.5698

The information below is about IL_7A0S_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05192.4

Basepair signature

cWW-L-R-L-R-L-cWW-L

Number of instances in this motif group

3

Unit IDs

4V49|1|B0|C|303
4V49|1|B0|A|304
4V49|1|B0|A|305
4V49|1|B0|G|306
*
4V49|1|B0|C|354
4V49|1|B0|G|355
4V49|1|B0|A|356
4V49|1|B0|A|357
4V49|1|B0|C|358
4V49|1|B0|G|359

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain BS

50S ribosomal protein L24