IL_4V49_092

3D structure

PDB id

4V49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

8.7 Å

Loop

Sequence

CUAAG*CGAAG

Length

10 nucleotides

Bulged bases

4V49|1|B0|A|1167

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V49_092 not in the Motif Atlas

Homologous match to IL_7A0S_033

Geometric discrepancy: 0.173

The information below is about IL_7A0S_033

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_38507.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

16

Unit IDs

4V49|1|B0|C|1009
4V49|1|B0|U|1010
4V49|1|B0|A|1011
4V49|1|B0|A|1012
4V49|1|B0|G|1013
*
4V49|1|B0|C|1164
4V49|1|B0|G|1165
4V49|1|B0|A|1166
4V49|1|B0|A|1167
4V49|1|B0|G|1168

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain B9

5S ribosomal RNA; 5S rRNA

Chain BO

50S ribosomal protein L20

Chain BX

50S ribosomal protein L30