IL_4V49_164

3D structure

PDB id

4V49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

8.7 Å

Loop

Sequence

CGAAGAAC*GGGAG

Length

13 nucleotides

Bulged bases

4V49|1|B0|A|3132

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V49_164 not in the Motif Atlas

Homologous match to IL_3U4M_004

Geometric discrepancy: 0.4619

The information below is about IL_3U4M_004

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_70923.9

Basepair signature

cWW-tSS-tSH-L-tHS-tHS-cWW

Number of instances in this motif group

27

Unit IDs

4V49|1|B0|C|3129
4V49|1|B0|G|3130
4V49|1|B0|A|3131
4V49|1|B0|A|3132
4V49|1|B0|G|3133
4V49|1|B0|A|3134
4V49|1|B0|A|3135
4V49|1|B0|C|3136
*
4V49|1|B0|G|3155
4V49|1|B0|G|3156
4V49|1|B0|G|3157
4V49|1|B0|A|3158
4V49|1|B0|G|3159

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains