IL_4V4I_004
3D structure
- PDB id
- 4V4I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.71 Å
Loop
- Sequence
- GGGAG*CGUGGAUC
- Length
- 13 nucleotides
- Bulged bases
- 4V4I|1|w|G|101
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V4I_004 not in the Motif Atlas
- Homologous match to IL_7A0S_004
- Geometric discrepancy: 0.4841
- The information below is about IL_7A0S_004
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_94910.1
- Basepair signature
- cWW-tSS-tSH-L-R-R-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
4V4I|1|w|G|81
4V4I|1|w|G|82
4V4I|1|w|G|83
4V4I|1|w|A|84
4V4I|1|w|G|85
*
4V4I|1|w|C|97
4V4I|1|w|G|98
4V4I|1|w|U|99
4V4I|1|w|G|101
4V4I|1|w|G|102
4V4I|1|w|A|103
4V4I|1|w|U|104
4V4I|1|w|C|105
Current chains
- Chain w
- 23S LARGE SUBUNIT RIBOSOMAL RNA
Nearby chains
- Chain S
- 50S ribosomal protein L24
- Chain W
- 50S ribosomal protein L29
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