IL_4V4I_057

3D structure

PDB id

4V4I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements.

Experimental method

X-RAY DIFFRACTION

Resolution

3.71 Å

Loop

Sequence

UG*CACAA

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V4I_057 not in the Motif Atlas

Homologous match to IL_9DFE_053

Geometric discrepancy: 0.5073

The information below is about IL_9DFE_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_00881.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

2

Unit IDs

4V4I|1|w|U|1415
4V4I|1|w|G|1416
*
4V4I|1|w|C|1582
4V4I|1|w|A|1583
4V4I|1|w|C|1585
4V4I|1|w|A|1586
4V4I|1|w|A|1587

Current chains

Chain w

23S LARGE SUBUNIT RIBOSOMAL RNA

Nearby chains