IL_4V5M_183

3D structure

PDB id

4V5M (explore in PDB, NAKB, or RNA 3D Hub)

Description

tRNA tranlocation on the 70S ribosome: the pre-translocational translocation intermediate TI(PRE)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.8 Å

Loop

Sequence

UG*CACAA

Length

7 nucleotides

Bulged bases

4V5M|1|BA|C|1584

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V5M_183 not in the Motif Atlas

Homologous match to IL_9DFE_053

Geometric discrepancy: 0.3796

The information below is about IL_9DFE_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_00881.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

2

Unit IDs

4V5M|1|BA|U|1415
4V5M|1|BA|G|1416
*
4V5M|1|BA|C|1582
4V5M|1|BA|A|1583
4V5M|1|BA|C|1584
4V5M|1|BA|A|1586
4V5M|1|BA|A|1587

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains