IL_4V5O_031
3D structure
- PDB id
- 4V5O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.93 Å
Loop
- Sequence
- CGUAG*UCAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5O_031 not in the Motif Atlas
- Homologous match to IL_4V88_418
- Geometric discrepancy: 0.1978
- The information below is about IL_4V88_418
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.4
- Basepair signature
- cWW-R-L-tHS-tHW-cWW
- Number of instances in this motif group
- 18
Unit IDs
4V5O|1|AA|C|621
4V5O|1|AA|G|622
4V5O|1|AA|U|623
4V5O|1|AA|A|624
4V5O|1|AA|G|625
*
4V5O|1|AA|U|946
4V5O|1|AA|C|947
4V5O|1|AA|A|948
4V5O|1|AA|A|949
4V5O|1|AA|G|950
Current chains
- Chain AA
- 18S RRNA
Nearby chains
- Chain AH
- RIBOSOMAL PROTEIN S8 CONTAINING PROTEIN
- Chain AL
- 40S RIBOSOMAL PROTEIN S12
- Chain AO
- RPS13E
- Chain AQ
- RIBOSOMAL PROTEIN S17 CONTAINING PROTEIN
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