IL_4V5O_053
3D structure
- PDB id
- 4V5O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.93 Å
Loop
- Sequence
- ACA*UCCCU
- Length
- 8 nucleotides
- Bulged bases
- 4V5O|1|AA|C|1131
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5O_053 not in the Motif Atlas
- Homologous match to IL_4V88_443
- Geometric discrepancy: 0.1659
- The information below is about IL_4V88_443
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.9
- Basepair signature
- cWW-cWS-cHS-L-cWW-tWH
- Number of instances in this motif group
- 15
Unit IDs
4V5O|1|AA|A|1130
4V5O|1|AA|C|1131
4V5O|1|AA|A|1132
*
4V5O|1|AA|U|1589
4V5O|1|AA|C|1590
4V5O|1|AA|C|1591
4V5O|1|AA|C|1592
4V5O|1|AA|U|1593
Current chains
- Chain AA
- 18S RRNA
Nearby chains
- Chain A1
- RIBOSOMAL PROTEIN S28E CONTAINING PROTEIN
- Chain A5
- RIBOSOMAL PROTEIN S26E CONTAINING PROTEIN
- Chain AG
- RIBOSOMAL PROTEIN S7 CONTAINING PROTEIN
- Chain AI
- RPS16E, 40S RIBOSOMAL PROTEIN RPS16E
Coloring options: