IL_4V61_024
3D structure
- PDB id
- 4V61 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Homology model for the Spinach chloroplast 30S subunit fitted to 9.4A cryo-EM map of the 70S chlororibosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.4 Å
Loop
- Sequence
- UCAAAUCC*GACAGG
- Length
- 14 nucleotides
- Bulged bases
- 4V61|1|AA|G|580
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V61_024 not in the Motif Atlas
- Homologous match to IL_5J7L_030
- Geometric discrepancy: 0.2081
- The information below is about IL_5J7L_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_78349.3
- Basepair signature
- cWW-L-R-L-R-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
4V61|1|AA|U|553
4V61|1|AA|C|554
4V61|1|AA|A|555
4V61|1|AA|A|556
4V61|1|AA|A|557
4V61|1|AA|U|558
4V61|1|AA|C|559
4V61|1|AA|C|560
*
4V61|1|AA|G|576
4V61|1|AA|A|577
4V61|1|AA|C|578
4V61|1|AA|A|579
4V61|1|AA|G|580
4V61|1|AA|G|581
Current chains
- Chain AA
- 16S rRNA
Nearby chains
- Chain AD
- Ribosomal Protein S4
- Chain AH
- Ribosomal Protein S8
- Chain AP
- Ribosomal Protein S16
- Chain AQ
- Ribosomal Protein S17
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