IL_4V69_155

3D structure

PDB id

4V69 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex-bound E.coli 70S ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

6.7 Å

Loop

Sequence

AUG*CUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V69_155 not in the Motif Atlas

Geometric match to IL_4WZM_001

Geometric discrepancy: 0.2

The information below is about IL_4WZM_001

Detailed Annotation

Isolated cWH basepair

Broad Annotation

Isolated cWH basepair

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

4V69|1|BB|A|2108
4V69|1|BB|U|2109
4V69|1|BB|G|2110
*
4V69|1|BB|C|2179
4V69|1|BB|U|2180
4V69|1|BB|U|2181

Current chains

Chain BB

23S ribosomal RNA

Nearby chains

Chain AW

Transfer RNA; tRNA

Chain B5

50S ribosomal protein L1