IL_4V6K_184
3D structure
- PDB id
- 4V6K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural insights into cognate vs. near-cognate discrimination during decoding.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 8.25 Å
Loop
- Sequence
- UGUC*GUCAA
- Length
- 9 nucleotides
- Bulged bases
- 4V6K|1|BA|A|1196
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6K_184 not in the Motif Atlas
- Geometric match to IL_5C5W_001
- Geometric discrepancy: 0.2597
- The information below is about IL_5C5W_001
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_77658.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 34
Unit IDs
4V6K|1|BA|U|1060
4V6K|1|BA|G|1061
4V6K|1|BA|U|1062
4V6K|1|BA|C|1063
*
4V6K|1|BA|G|1193
4V6K|1|BA|U|1194
4V6K|1|BA|C|1195
4V6K|1|BA|A|1196
4V6K|1|BA|A|1197
Current chains
- Chain BA
- 16S ribosomal RNA
Nearby chains
- Chain BB
- Transfer RNA; tRNA
- Chain BD
- mRNA
- Chain BG
- 30S ribosomal protein S3
- Chain BI
- 30S ribosomal protein S5
- Chain BN
- 30S ribosomal protein S10
- Chain BR
- 30S ribosomal protein S14
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