IL_4V6L_201
3D structure
- PDB id
- 4V6L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural insights into cognate vs. near-cognate discrimination during decoding.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.2 Å
Loop
- Sequence
- CCU*AUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6L_201 not in the Motif Atlas
- Homologous match to IL_5J7L_257
- Geometric discrepancy: 0.2022
- The information below is about IL_5J7L_257
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_07785.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 33
Unit IDs
4V6L|1|BB|C|564
4V6L|1|BB|C|565
4V6L|1|BB|U|566
*
4V6L|1|BB|A|575
4V6L|1|BB|U|576
4V6L|1|BB|G|577
Current chains
- Chain BB
- 50S ribosomal RNA 23S
Nearby chains
- Chain BE
- 50S ribosomal protein L3
- Chain BF
- 50S ribosomal protein L4
- Chain BM
- 50S ribosomal protein L15
- Chain BR
- 50S ribosomal protein L20
- Chain BS
- 50S ribosomal protein L21
- Chain Bc
- 50S ribosomal protein L32
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