IL_4V6Y_083
3D structure
- PDB id
- 4V6Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12 Å
Loop
- Sequence
- GAAAC*GAGAUAGC
- Length
- 13 nucleotides
- Bulged bases
- 4V6Y|1|BA|G|801, 4V6Y|1|BA|G|805
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6Y_083 not in the Motif Atlas
- Geometric match to IL_5TBW_028
- Geometric discrepancy: 0.2731
- The information below is about IL_5TBW_028
- Detailed Annotation
- tHW-tHW cross-strand stack
- Broad Annotation
- No text annotation
- Motif group
- IL_17470.7
- Basepair signature
- cWW-tWW-L-R-tWH-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
4V6Y|1|BA|G|674
4V6Y|1|BA|A|675
4V6Y|1|BA|A|676
4V6Y|1|BA|A|677
4V6Y|1|BA|C|678
*
4V6Y|1|BA|G|799
4V6Y|1|BA|A|800
4V6Y|1|BA|G|801
4V6Y|1|BA|A|802
4V6Y|1|BA|U|803
4V6Y|1|BA|A|804
4V6Y|1|BA|G|805
4V6Y|1|BA|C|806
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BE
- 50S ribosomal protein L2
- Chain BL
- 50S ribosomal protein L13
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