IL_4V70_124

3D structure

PDB id

4V70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

UGAGGU*AUGGAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V70_124 not in the Motif Atlas

Geometric match to IL_7A0S_018

Geometric discrepancy: 0.338

The information below is about IL_7A0S_018

Detailed Annotation

Triple sheared with non-canonical cWW

Broad Annotation

Triple sheared

Motif group

IL_29495.1

Basepair signature

cWW-tSH-tSH-tHS-tHS-cWW

Number of instances in this motif group

6

Unit IDs

4V70|1|BA|U|1720
4V70|1|BA|G|1721
4V70|1|BA|A|1722
4V70|1|BA|G|1723
4V70|1|BA|G|1724
4V70|1|BA|U|1725
*
4V70|1|BA|A|1735
4V70|1|BA|U|1736
4V70|1|BA|G|1737
4V70|1|BA|G|1738
4V70|1|BA|A|1739
4V70|1|BA|G|1740

Current chains

Chain BA

23S ribosomal RNA

Nearby chains